Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKISKALTWFIISFIIFHLILFIMWGEHQEYWYLYTGIMLIAGISYVFYQRDIESKRLLTSIGVGIITAIILIMLQLLFSLITSNLSYSSLIKELARTGVNWKWQMLVTLLFVIPCHELYMRTVLQKELTHFSIPKWIAILITAICSSSLFIYLDNWWIVTFIFVAQVILSLSYEYTRRIATTSVAQIVAIILLLIFNA |
2HAC Chain:A ((10-24)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------FIYGVILTALFLRVK--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HAC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3298 for 50 contacts (-66.0/contact) +
2D Compatibility (PS) -1566 + (NN) -506 + (LL) 20308
1D Compatibility (HY) -1600 + (ID) 200
Total energy: 13138.0 ( 262.76 by residue)
QMean score : 0.025
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