Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRRAHAKKPLTTKSCKVKEGYMRRAHAKKPLTTKSCKVKEGYMHRAQAKKPLTTKGCKEEEGYMHRAHA
3PSM Chain:A ((22-31))
------------------------------------------------------DHCKNKEHLI-----
General information:
TITO was launched using:
RESULT:
Template:
3PSM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1019 for 33 contacts (30.9/contact) +
2D Compatibility (PS) -1037 + (NN) -224 + (LL) 4392
1D Compatibility (HY) -1200 + (ID) 150
Total energy: 2800.0 ( 84.85 by residue)
QMean score : 0.368
(partial model without unconserved sides chains):
PDB file :
Tito_3PSM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PSM-query.scw
PDB file :
Tito_Scwrl_3PSM.pdb
: