Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEPLLSLKSVSKSYDDLNILDDIDIDIESGYFYTLLGPSGCGKTTILKLIAGFEYPDSGEVIYQNKPIGN------LPPNKRKVNTVFQDYALFPHLNVYDNIAFGLKLKKLSKTEIDQKVTEALKLVKLSGYEKRNINEMSGGQKQRVAIARAIVNEPEILLLDESLSALDLKLRTEMQYELRELQSRLGITFIFVTHDQEEALALSDFLFVLKDGKIQQFGTPTDIYDEPVNRFVADFIGES--NIVEGRMVRD-------YVVNIYGQDFECVDMGIPENKKVEVVIRPEDI------SLIKAEEGLFKATVDSMLFRGVHYEICCIDNKGYEWVIQTTKKAEV--GSEVGLYFDPEAIHIMVPGETEEEFDKRIESYEEVDNA |
| 2D62 Chain:A ((7-366)) | ----VKLINIWKRFGDVTAVKDLSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTRGQIYIEDNLVADPEKGVFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDKRVREVAEMLGLTELLNRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNKGELQQVGTPDEVYYKPVNTFVAGFIGSPPMNFLDATITDDGFLDFGEFKLKLLQDQFEVLEEENMVGKEVIFGIRPEDVHDASFTHIDVPEENTVKATVDIIENLGGE-KIVHLRRGNISFTAKFPKESKVREGDEVSVVFDMKKIHIF---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D62.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215714 for 2594 contacts (-83.2/contact) +
2D Compatibility (PS) -37118 + (NN) -14059 + (LL) 1768
1D Compatibility (HY) -33600 + (ID) 7150
Total energy: -305873.0 ( -117.92 by residue)
QMean score : 0.480
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