Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKQATMKNAALKQLTKDADEILHLIKVQLDNLTLPSCPLYEEVLDTQMFGLQKEVDFAVKLGLVDREDGKQIMLRLEKELSKLHEAFTLV
2GBO Chain:A ((1-82))
-MDEGISKKFAIQLLEDDAERIKMLIRNQKNSLCISQCKAFEEVVDTQMYGFSRQVTYATRLGILTNDEGHRLLSDLERELNQ--------
General information:
TITO was launched using:
RESULT:
Template:
2GBO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 13566 for 344 contacts (39.4/contact) +
2D Compatibility (PS) -8361 + (NN) -1381 + (LL) 1020
1D Compatibility (HY) 7600 + (ID) 250
Total energy: 12194.0 ( 35.45 by residue)
QMean score : 0.318
(partial model without unconserved sides chains):
PDB file :
Tito_2GBO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GBO-query.scw
PDB file :
Tito_Scwrl_2GBO.pdb
: