Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIIKYLTILVISVVILTSCQSSSSQESTKSGEFRIVPTTVALTMTLDKLDLPIVG------KPTSYKTLPNRYKDVPEIGQPMEPNVEAVKKLKPTHVLSVST----IKDEMQPFYKQLNMKGYFYDF----DSLKGMQKSITQLGDQFNRKAQAKELNDHLNSVKQKIENKAAKQKKHPKVLILMGVPGSYLVATDKSYIGDLVKIAGGENVI---------KVKDRQYISSNTENLLNINPD-IILRLPHGMPEEVKKMFQKEFKQNDIWKHFKAVKNNHVYDLEEVPFGITANVDADKAMTQLYDLFYKDKK |
| 3LHS Chain:A ((25-263)) | ----------------------------------RIVVLEYSFADALAALDVKPVGIADDGKKKRIIKPVREKIGDYTSVGTRKQPNLEEISKLKPDLIIADSSRHKGINKELNKIAPTLSLKSFDGDYKQNINSFKTIAKALNKEKEGEKRLAEHDKL---INKYKDEI-----KFDRNQKVLPAVVAKAGLLAHPNYSYVGQFLNELGFKNALSDDVTKGLSKYLKGPYLQLDTEHLADLNPERMIIMTDHAKKDSAE--FKK-LQEDATWKKLNAVKNNRV-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LHS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78125 for 1576 contacts (-49.6/contact) +
2D Compatibility (PS) -22715 + (NN) -12553 + (LL) 5900
1D Compatibility (HY) -14400 + (ID) 3150
Total energy: -125043.0 ( -79.34 by residue)
QMean score : 0.423
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