Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRMKRFLTIVQILLVVIIIIFGYKIVQTYIEDKQERANYEKLQQKFQMLMSKHQEHVRPQFESLEKINKDIVGWIKLSGTSLNYPVLQGKTNHDYLNLDFEREHRRKGSIFMDFRNELKNLNHNTILYGHHVGDNTMFDVLEDYLKQSFYEKHKIIEFDNKYGKYQLQVFSAYKTTTKDNYIRTDFENDQDYQQFLDETKRKSVINSDVNVTVKDKIMTLSTCEDAYSETTKRIVVVAKIIKVS
1QXA Chain:A ((22-235))
------------------------------EDKQERANYEKLQQKFQMLMSKHQAHVRPQFESLEKINKDIVGWIKLSGTSLNYPVLQGKTNHDYLNLDFEREHRRKGSIFMDFRNELKNLNHNTILYGHHVGDNTMFDVLEDYLKQSFYEKHKIIEFDNKYGKYQLQVFSAYKTTTKDNYIRTDFENDQDYQQFLDETKRKSVINSDVNVTVKDRIMTLSTCEDAYSETTKRIVVVAKIIKVS
General information:
TITO was launched using:
RESULT:
Template:
1QXA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72775 for 1652 contacts (-44.1/contact) +
2D Compatibility (PS) -22813 + (NN) -6544 + (LL) 4292
1D Compatibility (HY) -29200 + (ID) 10600
Total energy: -137640.0 ( -83.32 by residue)
QMean score : 0.752
(partial model without unconserved sides chains):
PDB file :
Tito_1QXA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QXA-query.scw
PDB file :
Tito_Scwrl_1QXA.pdb
: