Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIDYLTLFPEMFDGVLNHSIMKRAQENNKLQINTVNFRDYAINKHNQVDDYPYGGGQGMVLKPEPVFNAMEDLDVTEQTR--VILMCPQGEPFSHQKAVELSKADHIVFICGHYEGYDERIRTHLVTDEISMGDYVLTGGELPAMTMTDAIVRLIPGVLGNEQSHQDDSFSDGLLEFPQYTRPREFKGLTVPDVLLSGNHANIDAWRHEQKLIRTYNKRPDLIEKYPLTNEDKQILERYKIGLKKG
1UAM Chain:A ((21-258))
MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVLGKQA--EEDSFADGLLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLALTDEQRKLLK---------
General information:
TITO was launched using:
RESULT:
Template:
1UAM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122374 for 1689 contacts (-72.5/contact) +
2D Compatibility (PS) -25533 + (NN) -11232 + (LL) 436
1D Compatibility (HY) -23600 + (ID) 5300
Total energy: -187603.0 ( -111.07 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_1UAM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UAM-query.scw
PDB file :
Tito_Scwrl_1UAM.pdb
: