Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYNKDDVLKQADNIANKIKNLDTIKTYQQIEAQIHQNQTIKTKMDML-KKHQKQAVNFQNYGKQNALEQSEHTIQSIEAEINTLPIVEQFQTSQYEANQLLKMFVSTMETRLNDHNKAKHSD
2J7U Chain:A ((281-360))
LHNEEKIIQQMDPEHRQLANAIFKLTYQNKVVKVQRPTPTGTVMDIISRKDQRGSGQVGTYGLNTFTNMEAQLVRQMEGE------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2J7U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 32983 for 392 contacts (84.1/contact) +
2D Compatibility (PS) -7721 + (NN) 2191 + (LL) 3240
1D Compatibility (HY) -2000 + (ID) 800
Total energy: 27893.0 ( 71.16 by residue)
QMean score : 0.140
(partial model without unconserved sides chains):
PDB file :
Tito_2J7U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2J7U-query.scw
PDB file :
Tito_Scwrl_2J7U.pdb
: