Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALSTFKREHIKKNLRNDEYDLVIIGGGITGAGIALDASERGMKVALVEMQDFAQGTSSRSTKLVHGGLRYLKQFQIGVVAETGKERAIVYENGPHVTTPEWMLLPMHKGGTFGKFSTSIGLGMYDRLAGVKKSERKKMLSKKETLAKEPLVKKEGLKGGGYYVEYRTDDARLTIEVMKRAAEKGAEIINYTKSEHFTYDKNQQVNGVKVI---DKLTNENYTIKAKKVVNAAGPWV----DDVRSGDYARNNKKLRLTKGVHVVIDQSKFPLGQAVYFDTEKDGRMIFAIPREGK-AYVGTTDTFYDNIKSSPLTTQEDRDYLIDAINYMFPSVNVTDEDIESTWAGIRPLIYEEGKDPSEISR------KDEIWEGKSGLLTIAGGKLTGYRHMAQDIVDLVSKRLKKDYGLTFSPCNTKGLAISGGDVGGSK-NFDAFVEQKVDVAKGFGIDEDVARRLASKYGSNVDELFNIAQTSQYHDSKLPLEIY-VELVYSIQQEMVYKPNDFLVRRSGK-MYFNIKDVLDYKDAVIDIMADMLDYSPAQIEAYTEEVEQAIKEAQHGNNQPAVKE |
| 2QCU Chain:A ((27-478)) | ------------------------------------------LSVLMLEAQDLACATSSASSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPHIAFPMRFRLP-HRPHLRPAWMIRIGLFMYDHLG-----KRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVVRKGGEVLTRTRAT-----SARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDD---GMHLPSPYGIRLIKGSHIVV--PRVHTQKQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEESEINYLLNVYNTHFKK-QLSRDDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDE--NGKAPLLSVFGGKLTTYRKLAEHALEKLTP-----YYQGIGPAWTKESVLPGGAIEGDRDDYAARLRRRYPF-----LTESLARHYARTYGSNSELLLGNAGTVSDLGEDFGHEFYEAELKYLVDHEWVRRADDALWRRTKQGMWLN--------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2QCU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -30720 for 3459 contacts (-8.9/contact) +
2D Compatibility (PS) -46558 + (NN) -10745 + (LL) 8356
1D Compatibility (HY) -27200 + (ID) 7200
Total energy: -114067.0 ( -32.98 by residue)
QMean score : 0.310
|
|
|