Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLNIALLGLGTVGSGVVKIIEENRQQIQDTLNKDIVI-----KHILVRDKSKKRPLNISQY--HLTEDVN--EILNDDSLDIIVE-----VMGGIEPTVDWLRTALKNKKHVITANKDLLAVHLKLLEDLAEENGVALKFEASVAGGIPIVNAINNGLNANNISKFMGILNGTSNFILSKMTKEQTTFEEALDEAKRLGFAEADPTDDVEGVDAARKVVITSYLSFNQVIKLNDVKRRGISGVTLTDINVADQLGYKIKLIGKGIYENGKVNASVEPTLIDKKHQLAAVEDEYNAIYVIGDAVGDTMFYGKGAGSLATGSAVVSDLLNVALFFESDLHTLPPHFELKTDKTREMMDSDAEINIKEKSNFFVVVNHVKGSIENFENELKAILPFHRSLRVANYDNQSYAAVIVGLESSPEELITKHGYEVDKVYPVEGV |
| 3DO5 Chain:A ((3-322)) | ---IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVRSADYDVLIEASVTR------EGVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGVRLMYEATVGGAMPVVKLAKRYLALCEIESVKGIFNGTCNYILSRMEEERLPYEHILKEAQELGYAEADPSYDVEGIDAALKLVIIAN-TIGVKASYEDVEVTGITQITPEAFQVAAEKGYTIRLIAEVSREKLKVS----PRLVPFHHPL-AIKGTMNAAMFKTDTAGSIFVAGRGAGKEETASAILSDLYEI------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3DO5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -139468 for 2523 contacts (-55.3/contact) +
2D Compatibility (PS) -32058 + (NN) -349 + (LL) 9008
1D Compatibility (HY) -23600 + (ID) 5750
Total energy: -192217.0 ( -76.19 by residue)
QMean score : 0.416
|
|
|