Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKLFIPYIMGNKDLIENATLLSENGADIIEIGVPFSDPVADGPVIMEAGQQAIKQGITIDYIFNQLEKHGDQIK-CNYVLMTYYNIICHYGEQAFFEKCRDTGVYGLIIPDLPYELSQRLKQQFSHYGVKIISLVAMTTDDKRIKDIVSHAEGFIYTVTMNATTGQNGAFHPELKRKIESIKAIANVPVVAGFGIRTPQHVADIKEVADGIVIGSEIVKRFKSNTREEIIRYLQSIQQTLNN
2EKC Chain:A ((42-262))
-----------------------KNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLMTYYNPIFRIGLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAADEMTYFVSVTG--------YERIKKKVEEYRELCDKPVVVGFGVSKKEHAREIGSFADGVVVGSALVKLAGQKKIEDLGNLVKELKEGLRE
General information:
TITO was launched using:
RESULT:
Template:
2EKC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -171087 for 1616 contacts (-105.9/contact) +
2D Compatibility (PS) -23535 + (NN) -11034 + (LL) 1936
1D Compatibility (HY) -19200 + (ID) 3850
Total energy: -226770.0 ( -140.33 by residue)
QMean score : 0.641
(partial model without unconserved sides chains):
PDB file :
Tito_2EKC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EKC-query.scw
PDB file :
Tito_Scwrl_2EKC.pdb
: