Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIELKHVTFGYNKKQMVLQDINITIPDGENVGILGESGCGKSTLASLVLGLFKPVKGEIYLSDNAV----LTIFQHPLTSFNPD-WTIETSLKEALYYYRGLTDNTAQDQLLLQHLSTFELNAQLLTKLP-----------SEVSGGQLQRFNVMRSLLAQPRVLICDEITSNLDVIAEQNVINILKAQTITNLNHFIVISHDLSVLQRLVNRIIVLKDGMIVDDFAIEELFNVDRHPYTKELVQTFSY
4S0F Chain:A ((489-724))
-IEFRNVDFRYGLRKPVLKNINLTIPKGKTVAIVGESGSGKTTLAKLLMNFYSPEKGDILINGHSIKNISLELIRKKIAFVSQDVFIFSGTVKENLCLG---NENVDMDEII--KAAKMANAHDFIEKLPLKYDTFLNESGANLSEGQKQRLAIARALLKKPDILILDQATSNLDSITENHIKDAIYG--LEDDVTVIIIAHRLSTIVN-CDKIYLLKDGEIVESGSHTELIAL-KGCYFKMWKQT---
General information:
TITO was launched using:
RESULT:
Template:
4S0F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -161644 for 1701 contacts (-95.0/contact) +
2D Compatibility (PS) -23579 + (NN) -8352 + (LL) 1076
1D Compatibility (HY) -21600 + (ID) 3800
Total energy: -217899.0 ( -128.10 by residue)
QMean score : 0.449
(partial model without unconserved sides chains):
PDB file :
Tito_4S0F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4S0F-query.scw
PDB file :
Tito_Scwrl_4S0F.pdb
: