Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIISISETPNHNTMKITLSES-REGMTSDTYTKVDDSQPAFINDILKVEGVKSIFHVMDFISVDKEN-DANWETVLPKVEAVFE
2LTM Chain:A ((12-91))
--FIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDSITVTKENEELDWNLLKPDIYA---
General information:
TITO was launched using:
RESULT:
Template:
2LTM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21736 for 489 contacts (-44.4/contact) +
2D Compatibility (PS) -8440 + (NN) -3705 + (LL) 700
1D Compatibility (HY) -2400 + (ID) 1250
Total energy: -36831.0 ( -75.32 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_2LTM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LTM-query.scw
PDB file :
Tito_Scwrl_2LTM.pdb
: