Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLQTTYPSNNYPIFVEHGAIDHISTYIDQFDQSFILIDEH-VNQYFADKFDDILSYENVHKVII--PAGEKTKTFEQYQETLEYILSHHVTRNTAIIAVGGGATGDFAGFVAATLLRGVHFIQVPTTILAH-DSSVGGKVGINSKQGKNLIGAFYRPTAVIYDLDFLKTLPFEQILSGYAEVYKHALLNGESTTQEIEQHFKDREILQSLN--GMDKYIAKGIETKLDIVVADEKEQGVRKFLNLGHTFGHAVE----YNHKIAHGHAVMIGIIYQFIVANI--LFNSNHDIQHYINYLTKLGYPLETITDIDFETIYQYMLSDKKNDKQGVQMVLIKHFG-DIVVQHIDQTTLQHACEQLKTYFK |
| 3OKF Chain:A ((40-389)) | ---------RSYPISIGAGLFANPALLSLSAKQKVVIVTNHTVAPLYAPAIISLLDHIGCQHALLELPDGEQYKTLETFNTVMSFLLEHNYSRDVVVIALGGGVIGDLVGFAAACYQRGVDFIQIPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQPKAVVIDTDCLTTLPAREFAAGMAEVIKYGIIYDSAFFDWLEAQM---EALYALDEQALTYAIARCCQIKAEVVAQDEK--GIRALLNLGHTFGHAIEAHMGYGNWL-HGEAVSAGTVMAAKTAQLQGLIDASQ-FERILAILKKAHLPVRTPENMTFADFMQHMMRDKKVLAGELRLVLPTSIGTSAVVKGVPEAVIAQAIEYCRT--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3OKF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -263535 for 2815 contacts (-93.6/contact) +
2D Compatibility (PS) -35678 + (NN) -2909 + (LL) 1264
1D Compatibility (HY) -30000 + (ID) 5950
Total energy: -336808.0 ( -119.65 by residue)
QMean score : 0.514
|
|
|