Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MINEQRLLNTFLELVQIDSETGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGEVPKLYLTSHMDTVVPAINVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQIPHGQIQFVITVGEESGLIGAKELNSELLDADFGYAIDASADVGTTVVGAPTQMLISAKIIGKTAHASTPKE-GVSAINIAAKAISRMKLGQVDEITTANIGKFHGGSATNIVADEVILEAEARSHDPERIKTQVKHMTDVFETTASELGGKA--EVTVEQSYPGF--KINDNEAVVKIAQESARNLGLSANTIISGGGSDGSIINTFGIPSVILGVGYEKIHTTNERMPIKSLNLLASQVLEIIKIVARQSK |
1FNO Chain:A ((129-408)) | --------------------------------------------------------------------------------------------------ITTDGKTLLGADDKAGVAEIMTALAVLKGNPIPHGDIKVAFTPDEEVGK-GAKHFDVEAFGAQWAYTVDGGG-VGELEFENFNAASVNIKIVGNNVHPGTAKGVMVNALSLAARIHAEVPADEAPETTEGYEGFYHLASMKGTV-DRAEMHYIIRDFDRKQFEARKRKMMEIAKKVGKGLHPDCYIELVIEDSYYNMREKVVEHPHILDIAQQAMRDCHITPEMKPIRGGTDGAQLSFMGLPCPNLFTGGYNYHGKHEFVTLEGMEKAVQVIVRIAELTAKRG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FNO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96577 for 2122 contacts (-45.5/contact) +
2D Compatibility (PS) -29838 + (NN) -12807 + (LL) 7064
1D Compatibility (HY) -10400 + (ID) 3800
Total energy: -146358.0 ( -68.97 by residue)
QMean score : 0.486
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