Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNLPMNKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGVKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSDDRLTDE-VKIKVLQRLSIASGHVGMVGGQMLDMQSEGQ--PIDLETLEMIHKTKTGALLTFAVMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAKLGKKVGSDLENNKSTYVSLLGKDGAEDKLTYHRDAAVDELTQIDEQFNTKHLLEIVDLFYSRDH |
| 4KKM Chain:A ((55-317)) | ----------------------------RLVEAMRYAAIGGGKRLRPLLVVATCALFNVDREAALRVGMAIECIHVYSLIHDDMPCMDNDDLRRGKPTVHKAFDDASAVLSGDALQALAFEILSEEKIHTDPHVRLELIQALAIASGKDGMVGGQAIDLAAETSTVPFDLPTITRLQQLKTGALFGFCLEAGAIMGRQNKDIRDRLKAYARDIGLAFQIADDLIDA-----------------GKATFLSLLGLEKARSQAQALVDQAIAHLSVFGSEAD--YLRSIARYIVA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KKM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92888 for 2007 contacts (-46.3/contact) +
2D Compatibility (PS) -26549 + (NN) -15035 + (LL) 2560
1D Compatibility (HY) -17600 + (ID) 4900
Total energy: -154412.0 ( -76.94 by residue)
QMean score : 0.527
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