Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTGKQKRYLRSLAHNIDPIFQIGKGGINENMIKQIDD--TLENRELIKVHVLQNNFDDKKELAETLSEATRSELVQVIGSMIVIYRESKENKEIELP
4COI Chain:A ((572-639))
------------------------------NMVKMIADMGVMYFAFNTKISVCEDGHAFYGERCPVCGKAKVDEYMRIVGYLVPVSAFNKERREIEYP
General information:
TITO was launched using:
RESULT:
Template:
4COI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1114 for 333 contacts (3.3/contact) +
2D Compatibility (PS) -6643 + (NN) 6369 + (LL) 1660
1D Compatibility (HY) -4400 + (ID) 850
Total energy: -2750.0 ( -8.26 by residue)
QMean score : 0.066
(partial model without unconserved sides chains):
PDB file :
Tito_4COI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4COI-query.scw
PDB file :
Tito_Scwrl_4COI.pdb
: