Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKISTKGRYGLTLMISLAKKEGQGCISLKSIAEENNLSDLYLEQLVGPLRNAGLIRSVRGAKGGYQLRVPAEEISAGDIIRLLEGPITFVESIESEPPAQKQLWIRMRDAVRDVLDNTTLKYLAEYVDTSEDLDGYMFYI
2Y75 Chain:A ((2-129))
LKISTKGRYGLTIMIELAKKHGEGPTSLKSIAQTNNLSEHYLEQLVSPLRNAGLVKSI----GGYVLGSEPDAITAGDIIRVLEGPISPVEVLEDEEPAKRELWIRIRDAVKEVLDSTTLEDLASYTD------------
General information:
TITO was launched using:
RESULT:
Template:
2Y75.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75241 for 861 contacts (-87.4/contact) +
2D Compatibility (PS) -13372 + (NN) -5855 + (LL) 844
1D Compatibility (HY) -12800 + (ID) 4150
Total energy: -110574.0 ( -128.43 by residue)
QMean score : 0.651
(partial model without unconserved sides chains):
PDB file :
Tito_2Y75.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Y75-query.scw
PDB file :
Tito_Scwrl_2Y75.pdb
: