Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNYLESL-YWIHERTKFGIKPGVKRMEWMLAQFNNPQNNIKGIHVGGTNGKGSTVAYLRTALVENGYEVGTFTSPFIETFNERISLNGVPISNDAIVELVSRIKPVSEMMERETDLGVATEFEIITAMMFLYFGEIHPVDFVIVEAGLGIKNDSTNVFTPVLSILTSIGLDHTDILGGTYLDIARDKGAIIKPNVPVIYAVKNEDALKYVRERAIEQHAKPIELDREIVVVSQNDEFTYRYKDY----ELETIILSMLGEHQKQNAALAITALIELNEQGLIELDFNKMIDGIESVRWTGRIEQVH-DKPLIILDGAHNSESIDALIDTIKQYHDKEKVDILFSAINGKPINEMVKHLSLIAHTFYATEFDFPKALRKEEIVGSIEN--DEIQLVDDYVEFIKNYQGDTLVITGSLYFISEVKSKLDFEAL |
1O5Z Chain:A ((13-428)) | MAYLEVLRYLYHK-----VKPGLERISMLLSKLGNPHLEYKTIHIGGTNGKGSVANMVSNILVSQGYRVGSYYSPHLSTFRERIRLNEEYISEEDVVKIYETMEPILNELDKE-EIFSPSFFEVVTAMAFLYFAEKN-VDIAVLEVGLGGRLDATNVVFPLCSTIVTVDR-------YTIEQIAWEKSGIIKERVPLVTGERKREALKVMEDVARKKSSRMYVIDKDFSVKVKSLKLHENRFDYCGENTFEDLVLTMNGPHQIENAGVALKTL----EATGLPLSEKAIREGLKNAKNLGRFEILEKNGKMYILDGAHNPHGAESLVRSLKLYFNGEPLSLVIGILDDKNREDILRKYTGIFERVIVTRVPSPRMKDMNSLVDMAKKFFKNVEVIEDPLEAIESTERAT-VVTGSLFLVGYVR-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O5Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -242493 for 3569 contacts (-67.9/contact) +
2D Compatibility (PS) -43058 + (NN) -13769 + (LL) 1512
1D Compatibility (HY) -34400 + (ID) 6300
Total energy: -338508.0 ( -94.85 by residue)
QMean score : 0.527
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