Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNECAFGTKDPVYLNYHDHVWGQPLYDSKALFKLLALESQHAGLSWLTILKKKEAYEEAFYDFEPEKVAQMTAQDIDRLMTFPNIVHHRKKLEAIVNQAQGYLKIEQAYGSFSKFLWSYVNGKPKDLQYEHASDRITVDDTATQLSKDLKQYGFKFLGPVTVFSFLEAAGLYDAHLKDCPSKPKHN
4AI4 Chain:A ((3-188))
MNECAFGTKDPVYLNYHDHVWGQPLYDSKALFKLLALQSQHAGLSWLTILKKKEAYEEAFYDFEPEKVAQMTAQDIDRLMTFPNIVHHRKKLEAIVNQAQGYLKIEQAYGSFSKFLWSYVNGKPKDLQYEHASDRITVDDTATQLSKDLKQYGFKFLGPVTVFSFLEAAGLYDAHLKDCPSKPKHN
General information:
TITO was launched using:
RESULT:
Template:
4AI4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88533 for 1441 contacts (-61.4/contact) +
2D Compatibility (PS) -19905 + (NN) -10728 + (LL) 0
1D Compatibility (HY) -26000 + (ID) 9250
Total energy: -154416.0 ( -107.16 by residue)
QMean score : 0.585
(partial model without unconserved sides chains):
PDB file :
Tito_4AI4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AI4-query.scw
PDB file :
Tito_Scwrl_4AI4.pdb
: