Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKLVVGSRRSKLALTQSQQFINKLKAVEPNLEIEIKEIVTKGDRIVDKQLSKVGGKGLFVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPEGSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSDDIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDGSCQVPIAGYATISDQKEIEFTGLIMTPDGKE--RFEYTMNGTDPVELGKTVSNKLKEQGAYEIIKRLNEQH
2YPN Chain:A ((6-303))---LRIATRQSPLALWQAHYVKDKLMASHPGLVVELVPMV-----------------GLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI-RAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELID-GEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNGAREIL-------


General information:
TITO was launched using:
RESULT:

Template: 2YPN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110977 for 2353 contacts (-47.2/contact) +
2D Compatibility (PS) -30607 + (NN) -22419 + (LL) 1808
1D Compatibility (HY) -19600 + (ID) 6350
Total energy: -188145.0 ( -79.96 by residue)
QMean score : 0.567

(partial model without unconserved sides chains):
PDB file : Tito_2YPN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YPN-query.scw
PDB file : Tito_Scwrl_2YPN.pdb: