Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKLVVGSRRSKLALTQSQQFINKLKAVEPNLEIEIKEIVTKGDRIVDKQLSKVGGKGLFVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPEGSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSDDIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDGSCQVPIAGYATISDQKEIEFTGLIMTPDGKE--RFEYTMNGTDPVELGKTVSNKLKEQGAYEIIKRLNEQH |
2YPN Chain:A ((6-303)) | ---LRIATRQSPLALWQAHYVKDKLMASHPGLVVELVPMV-----------------GLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI-RAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELID-GEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNGAREIL------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2YPN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -110977 for 2353 contacts (-47.2/contact) +
2D Compatibility (PS) -30607 + (NN) -22419 + (LL) 1808
1D Compatibility (HY) -19600 + (ID) 6350
Total energy: -188145.0 ( -79.96 by residue)
QMean score : 0.567
|
|
|