Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHKLAHTSFGIVGMFVNTCMVAKYVIINWEMFSMKKVNNDTVFGILQLETLLGDINSIFSEIESEYKMSREEILILLTLWQKGSMTLKEMDRFVEVKPYKRTRTYNNLVELEWIYKERPVDDERTVIIHFNEKLQQEKVELLNFISDAIASRATAMQNSLNAIIAV
1P4X Chain:A ((163-242))
------------------------------------------------------------------------ILAIITSQNKNIVLLKDLIETIHHKYPQTVRALNNLKKQGYLIKERSTEDERKILIHMDDAQQDHAEQLLAQVNQLLADK--------------
General information:
TITO was launched using:
RESULT:
Template:
1P4X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43301 for 479 contacts (-90.4/contact) +
2D Compatibility (PS) -8531 + (NN) -1576 + (LL) 7752
1D Compatibility (HY) -3600 + (ID) 1150
Total energy: -50406.0 ( -105.23 by residue)
QMean score : 0.538
(partial model without unconserved sides chains):
PDB file :
Tito_1P4X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P4X-query.scw
PDB file :
Tito_Scwrl_1P4X.pdb
: