Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKSVAIIGAGITGLSSAYFLKQQDPNIDVTIFEASNRPGGKIQSYRKDGYMIELGPESYLGRKTIMTELAKDIGLEQDIVTN--TTGQSYIFAKNKLYPIPGGSIMGIPTDIKPFVTTKLISPLGKLRAGLDLIKKPIQMQDG-DISVGAFFRARLGNEVLENLIEPLMGGIYGTDIDKLSLMSTFPNFKEKEEAFGSLIKG-MKDEKNKRLKQRQLYPG-APK--GQFKQFKHGLSSFIEALEQDVKNKGVTIRYNTSVDDIITSQKQYKIV---YSNQQEDVFDGVLVTTPHQVFLNWFGQDPAFDYFKTMDS----TTVATVVLAFDEKDIENTYDGTGFVIARTSDTDITACTWTSKKWPFTTPEGKVLIRAYVGKPGDTVVDDHTDNELVSIVRRDLSQMMTFKGDPEFTIVNRLPKSMPQYHVGHIQQIRQIQAHIKQTYPRLRVTGASFEAVGLPDCITQGKVAAEEVIAEL |
| 2IVE Chain:A ((18-471)) | ---NVAVVGGGISGLAVAHHLRSR--GTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDREPATRALAAALNLEGRIRAADPAAKRRYVYTRGRLRSVPASPPAFLASDILPLGA--------RLRVAGELFSR--RAPEGVDESLAAFGRRHLGHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQR--Q----AGTAPKLSGALSTFDGGLQVLIDALAASL---GDAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAHATAKLL--RPLDDALAALVAGIAYAPIAVVHLGFDAGTLPAP-DGFGFLVPAEEQRRMLGAIHASTTFPFRAEGGRVLYSCMVGGARQPGLVEQDEDALAALAREELKALAGVTARPSFTRVFRWPLGIPQYNLGHLERVAAIDAAL-QRLPGLHLIGNAYKGVGLNDCIRNAAQLADALVA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IVE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203574 for 3659 contacts (-55.6/contact) +
2D Compatibility (PS) -47099 + (NN) -18558 + (LL) 1664
1D Compatibility (HY) -26800 + (ID) 6300
Total energy: -300667.0 ( -82.17 by residue)
QMean score : 0.512
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