Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKDKDPKLNYHEEENSMVTDFEDLKELGKEMEQISDQNDQEKNSEEDSQ
2LCI Chain:A ((27-54))
----------------YQVRDVNDSDELKKEMKKLAEEKNFEKI------
General information:
TITO was launched using:
RESULT:
Template:
2LCI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10574 for 109 contacts (97.0/contact) +
2D Compatibility (PS) -3194 + (NN) -2755 + (LL) 740
1D Compatibility (HY) -1200 + (ID) 500
Total energy: 3665.0 ( 33.62 by residue)
QMean score : 0.530
(partial model without unconserved sides chains):
PDB file :
Tito_2LCI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LCI-query.scw
PDB file :
Tito_Scwrl_2LCI.pdb
: