Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYQQSSFKENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQVKTVIDYYHRFVERFPTVEVLSQASEDEVLKYWEGLGYYSRARNFHTAIKEVYDKYEGLVPKDPDQFKALKGVGPYTQAAVMSIAYNVPLATVDGNVFRVWSRLNDDYRDIKLQSTRKSYEQ---ELLPYVTTEAGTFNQAMMELGALICTPKNPLCLFCPVQENCEAFDKGTFEKLPVKSKNVSKKVIEQSVFLIRNNQGQYLLQKR-SEKLLHGMWQFPMFESEHARRK------MTEKIGHDIQPVETPIFELKHQFTHLTWKIKVYAA----SGAIN--IETLPDDMIWFNLSDRDQYTFPVPMSKIYQFING |
| 4YPH Chain:A ((12-356)) | --PAREFQRDLLDWFARERRDLPWRKDRDPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLEALADADEDEVLKAWEGLGYYSRVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVDGNVMRVLSRLFLVTDDIAKCSTRKRFEQIVREIMAY--ENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQAFAEGVAEELPVKM----VKQVPLAVAVLADDEGRVLIRKRDSTGLLANLWEFPSCETDGADGKEKLEQMV----GLQVELTE-PIVSFEHAFSHLVWQLTVFPGRLVHGGPVEEPYRLAPEDEL-------KAYAFPVSHQRVWR---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YPH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168667 for 2467 contacts (-68.4/contact) +
2D Compatibility (PS) -32975 + (NN) -5437 + (LL) 1632
1D Compatibility (HY) -34400 + (ID) 7850
Total energy: -247697.0 ( -100.40 by residue)
QMean score : 0.493
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