Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKTQIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVSQQLFAASMMLSAIKETKLEPP--LDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEIQDFKVPKGI----EDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGATFHIVSLPDSGTRIEVKAPLNKEDSYDD |
3GIF Chain:A ((26-216)) | -------------------------------------------------------------------------------------------------------------------------------------------------EERQRIARDLEDTLGQKLSLIGLKSDLARKLIYKDPEQAARELKSVQQTARTSLNEVRKIVSSMKGIRLKDELIN--IKQIL----EAADIMFIYE--EEKWPENISLLNENILSMCLKEAVTNVVKHSQAKTCRVDIQQLWKEVVITVSDDGTFKGE-------HGLLGMRERLEFANGSLHIDT--ENGTKLTMAIPNN------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41120 for 1192 contacts (-34.5/contact) +
2D Compatibility (PS) -20231 + (NN) -15519 + (LL) 14516
1D Compatibility (HY) -7200 + (ID) 2250
Total energy: -71804.0 ( -60.24 by residue)
QMean score : 0.521
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