Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRTLVLLITAIFILAACGNHKDDQAGKDNQKHNNSSNQVKEIATDKNVQGDNYRTLLPFKESQARGLLQDNMANSYNGGDFEDGLLNLSKEVFPTDKYLYQDGQFLDKKTINAYLNPKYTKREIDKMSEKDKKDKKANENLGLNPSHEGETNPEKIAEKSPAYLSNILEQDFYGGGDTKGKNIKGMTIGLAMNSVYYYKKEKDGPTFSKKLDDSEVKKQGKQMASEILSRLRENDDLKDIPIHFAIYKQSSEDSITPGEFITQATAEKSQTKLNEWHNINEKSALLPSS--TAADYDEN--LNNNFKQFNDNLQSYFSN--FTQAVGKVKFVDKKPQRLVVDLPIDYYGQAETIGITQYVTEQANKYFDKIDNYEIRIKDGNQPRALISKTKDDKEPQVHIYSN |
| 3N2Q Chain:A ((57-337)) | ----------------------------------------------------------PLKEQKVINTANIKTNSKLDLAEYENGLINIATQQFDTESHVLQLNQYIPEKLID-----------------------------------------ELVAKVEAPVLTNIIEQDYFGK---NELSLSGVMIGLAMSS---------------SVSNEEAMSKGTEVAKQLIEAINKNDKYNKSPITFAIFKQESTSSLKNGTYIASATVQKNDTNLGNWSTIDEKSYSYPSDEFTQAHGEDNTKINNFAKEIKG-----F-NGDFIPVNAKVSYKKDQMDTLNMNIVIKYNGKTELMALTQLAAQGMLDKLPKDAKVQLQIKSESKIEAVIIKEKNSDKPFV----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N2Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 72120 for 1933 contacts (37.3/contact) +
2D Compatibility (PS) -26827 + (NN) 943 + (LL) 5380
1D Compatibility (HY) 3200 + (ID) 1900
Total energy: 52916.0 ( 27.38 by residue)
QMean score : 0.116
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