Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKRSLLFLTVLLLLFSFSSITNEVSASSSFDKGKYKKGDDASYFEPTGPYLMVNVTGVDSKGNELLSPHYVEFPIKPGTTLTKEKIEYYVEWALDATAYKEFRVVELDPSAKIEVTYYDKNKKKEETKSFPITEKGFVVPDLSEHIKNPGFNLITKVVIEKK
1C78 Chain:A ((7-136))
---------------------------------GKYKKGDDASYFEPTGPYLMVNVTGVDGKGNELLSPHYVEFPIKPGTTLTKEKIEYYVEWALDATAYKEFRVVELDPSAKIEVTYYDKNKKKEETKSFPITEKGFVVPDLSEHIKNPGFNLITKVVIEKK
General information:
TITO was launched using:
RESULT:
Template:
1C78.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59809 for 861 contacts (-69.5/contact) +
2D Compatibility (PS) -14191 + (NN) -2306 + (LL) 2932
1D Compatibility (HY) -17600 + (ID) 6450
Total energy: -97424.0 ( -113.15 by residue)
QMean score : 0.688
(partial model without unconserved sides chains):
PDB file :
Tito_1C78.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C78-query.scw
PDB file :
Tito_Scwrl_1C78.pdb
: