Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE
3NX6 Chain:A ((3-94))
-IKPLHDRVVVKPI-------------------STKGEVVAIGAGKPLDNGSLHAPVVKVGDKVIYGQYAGSSYKSEGVEYKVLREDDILAVI-
General information:
TITO was launched using:
RESULT:
Template:
3NX6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22383 for 492 contacts (-45.5/contact) +
2D Compatibility (PS) -7822 + (NN) -567 + (LL) 1624
1D Compatibility (HY) -7200 + (ID) 1650
Total energy: -37998.0 ( -77.23 by residue)
QMean score : 0.714
(partial model without unconserved sides chains):
PDB file :
Tito_3NX6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NX6-query.scw
PDB file :
Tito_Scwrl_3NX6.pdb
: