Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIPTFSSIIFLFFKLKYYAIVTILVTMIIMYLSNFATVGLFLTLRKYTTDPAILLPLYILSFSSVSLLATYLVRISLKKFKKSYLSLNKTYMIIISFVLFATFAFFYIYSTNTSSNGDSLIPYALVFIGLIIFISVVILIMSLFTLKEMKYKRNQEEIETYYEYTLKIEAINNEMRKFRHDYVNILTTLSEYIREDDMIGLRAYFNKNIVPMKDNLQMNAIKLNGIENLKVREIKGLITAKILRAQEMNIPISIEIPDEVSSINLNMIDLSRSIGIILDNAIEASTEIDDPIIRVAFIESENSVTFIVMNKCADDIPR--IHELFQESFSTKGEGRGLGLSTLKE-IADNADNVLLDTIIENGFFIQKVEIINN |
3A0T Chain:A ((12-138)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IREVYVLFEEKI---RKMNIDFCFETDNEDLRVEADRTRIKQVLINLVQNAIEATGE--NGKIKITSEDMYTKVRVSVWN-SGPPIPEELKEKIFSPFFTTKTQGTGLGLSICRKIIEDEHGGKIWTENRENG----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A0T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62546 for 800 contacts (-78.2/contact) +
2D Compatibility (PS) -13868 + (NN) -4863 + (LL) 23404
1D Compatibility (HY) -6400 + (ID) 1850
Total energy: -66123.0 ( -82.65 by residue)
QMean score : 0.502
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