Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEIEKKKYKLDKDSVILLEQIRTLDKKRLKEKLTYLSDDKMKEVDNALMISLGLNAVAHQKN
4MZM Chain:A ((15-127))
-IRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEIEKKKYKLDKDSVILLEQIRTLDKKRLKEKLTYLSDDKMKEVDNALMISLGLNA------
General information:
TITO was launched using:
RESULT:
Template:
4MZM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66452 for 804 contacts (-82.7/contact) +
2D Compatibility (PS) -12524 + (NN) -6153 + (LL) 692
1D Compatibility (HY) -15600 + (ID) 5650
Total energy: -105687.0 ( -131.45 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_4MZM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MZM-query.scw
PDB file :
Tito_Scwrl_4MZM.pdb
: