Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLIAAAIAIGLSALGAGIGNGLIVSRTVEGVARQPEARGQLMGIMFIGVGLVEALPIIGVVIAFMTFAG
3V3C Chain:A ((7-70))
-SVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEDKIRGTLLLSLAFMEALTIYGLVVAL-----
General information:
TITO was launched using:
RESULT:
Template:
3V3C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25786 for 358 contacts (-72.0/contact) +
2D Compatibility (PS) -6280 + (NN) 805 + (LL) 572
1D Compatibility (HY) -7200 + (ID) 1350
Total energy: -39239.0 ( -109.61 by residue)
QMean score : 0.138
(partial model without unconserved sides chains):
PDB file :
Tito_3V3C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3V3C-query.scw
PDB file :
Tito_Scwrl_3V3C.pdb
: