Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMEVCPYLEETFKILGRSWNGLIINYLSRCNDCSAHFSDMKRDLKTITPRALSLKLSELAQWELVEKQIISTSPVQIIYVLTEKGKALAEALHPIEAWAQSYVDLTDQRTAK
4A5N Chain:A ((16-112))
-------VEFTLDVIGGKWKGILFYHMI---DGKKRFNEFRRICPSITQRMLTLQLRELEADGIVHREVYHQVPPKVEYSLTEFGRTLEPIVLQMKEWGESNRDVLE-----
General information:
TITO was launched using:
RESULT:
Template:
4A5N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53167 for 605 contacts (-87.9/contact) +
2D Compatibility (PS) -10569 + (NN) -3660 + (LL) 1276
1D Compatibility (HY) -8400 + (ID) 1350
Total energy: -75870.0 ( -125.40 by residue)
QMean score : 0.510
(partial model without unconserved sides chains):
PDB file :
Tito_4A5N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A5N-query.scw
PDB file :
Tito_Scwrl_4A5N.pdb
: