Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIILMGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETELGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQAEALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQREDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDVTKDVIDILDHL
4MKG Chain:A ((1-215))
MNIVLMGLPGAGKGTQAERIVEKYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVRERLSKSDCERGFLLDGFPRTVAQAEALEEILEEMGRPIDYVINIQVDKEELMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVTKRLEVNMKQTAPLLAFYDSKEVLVNVNGQQDIQDVFADVKVILGGL
General information:
TITO was launched using:
RESULT:
Template:
4MKG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80892 for 1689 contacts (-47.9/contact) +
2D Compatibility (PS) -22868 + (NN) -11374 + (LL) 0
1D Compatibility (HY) -26400 + (ID) 7550
Total energy: -149084.0 ( -88.27 by residue)
QMean score : 0.537
(partial model without unconserved sides chains):
PDB file :
Tito_4MKG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MKG-query.scw
PDB file :
Tito_Scwrl_4MKG.pdb
: