Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKDVKALKLMTLNDVLSQINGDMTLGIGTGSTMELLLPQMAQLIKERGYNITGVCTSNKIAFLAKELGIKICEINDVDHIDLAIDGADEVDPSLNIIKGGGGALFREKVIDEMASRFVVVVDETKIVQYLGETFKLPVEVDKFNWYHILRKIESYADIKVERRVNEDVAFITDNGNYILDCKLPKGIDPYKFHEYLIHLTGVFETGYFLDMADQVIVGTQEGVKILEK
3L7O Chain:A ((20-222))
----------------------MIVGLGTGSTAYYFVEEVGRRVQEEGLQVIGVTTSSRTTAQAQALGIPLKSIDEVDSVDVTVDGADEVDPNFNGIKGGGGALLMEKIVGTLTKDYIWVVDESKMVDTLG-AFRLPVEVVQYGAERLFREFEKKG-YKPSFREYDGVRFVTDMKNFIIDLDLGSIPDPIAFGNMLDHQVGVVEHGLFNGMVNRVIVAG---VRILE-
General information:
TITO was launched using:
RESULT:
Template:
3L7O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -133283 for 1663 contacts (-80.1/contact) +
2D Compatibility (PS) -21709 + (NN) -7466 + (LL) 1772
1D Compatibility (HY) -19600 + (ID) 4200
Total energy: -184486.0 ( -110.94 by residue)
QMean score : 0.537
(partial model without unconserved sides chains):
PDB file :
Tito_3L7O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L7O-query.scw
PDB file :
Tito_Scwrl_3L7O.pdb
: