Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKNKILTATLAVGLIAPLANPFIEISKAENKIEDIGQGAEIIKRTQDITSKRLAITQNIQFDFVKDKKYNKDALVVKMQGFISSRTTYSDLKKYPYIKRMIWPFQYNISLKTKDSNVDLINYLPKNKIDSADVSQKLGYNIGGNFQSAPSIGGSGSFNYSKTISYNQKNYVTEVESQNSKGVKWGVKANSFVTPNGQVSAYDQYLF-AQDPTGPAARDYFVPDNQLPPLIQSGFNPSFITTLSHERGKGDKSEFEITYGRNMDATYA-----YVTRHRLAVDRKHDAFKNRNVTVKYEVNWKTHEVKIKSITPK |
4IYT Chain:A ((11-289)) | -------------------------------NIENIGDGAEVVKRTEDTSSDKWGVTQNIQFDFVKDKKYNKDALILKMQGFINSKTTYYNYKNTDHIKAMRWPFQYNIGLKTNDPNVDLINYLPKNKIDSVNVSQTLGYNIGGNFNSGP----NGSFNYSKTISYNQQNYISEVEHQNSKSVQWGIKANSFITSLGKMSGHDPNLFVGYKPASQNPRDYFVPDNELPPLVHSGFNPSFIATVSHEKGSGDTSEFEITYGRNMDVTHATRRTT---NSYLEGSRIHNAFVNRNYTVKYEVNWKTHEIKVK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IYT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38860 for 2121 contacts (-18.3/contact) +
2D Compatibility (PS) -28359 + (NN) -11510 + (LL) 3080
1D Compatibility (HY) -26800 + (ID) 9250
Total energy: -111699.0 ( -52.66 by residue)
QMean score : 0.406
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