Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKINTTGGQIHGITQDGLDIFLGIPYAEPPVHDNRFKHSTLKTQWSEPIDATEIQPIPPQPDNKLEDFFSSQSTTFTE-HEDCLYLNIWKQHNDQTKKPVIIYFYGGSFENGHGTAELYQPAHLVQNNDIIVITCNYRLGALGYLDWS-YFNKDF--HSNNGLSDQINVIKWVHQFIESFGGDANNITLMGQSAGSMSILTLLKIPDIEPYFHKVVLLSGALRLDTLKSARNKAQYFQKMMRDYLDTDDVTSLSTDDILMLMAKLKQSRGPSKGLDLIYAPIKTDYIQNDYPTTK---------PIFACYTKDEGDIYITSEQK--KLSPQRFIDIMELNDIPLKYEDVQTAKQQS-----LAITHCYFKQPMKQFLQHLNIQDSNAQLWLAEFAWHDTSSAHYRSAYHILDMVFWFGNL-QILAAHQYPTTAHLKFLSRQMQNDLANFAKSGK-----MP--WPMYHNERRYYRTYQ |
| 2OGT Chain:A ((6-472)) | --VETRYGRLRGEMNEGVFVWKGIPYAKAPVGERRFLPPEPPDAWDGVREATSFGPVVMQPS----------------PSEDGLYLNIWSPAADGKKRPVLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAYAQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGSL-LLRSPETA----MAMTERILDKAGIRPGDRERLLSIPAEELLRAALSLGPGVMYGPVVDGRVLRRHPIEALRYGAASGIPILIGVTKDEYNLFTLTDPSWTKLGEKELLDRINREVGPVPEEAIRYY----WQTWLRIMTYRVFVEGMLR--TADAQAAQGADVYMYRFDYETPV-------CHALELPFVFHNLHQPGVANFVGNRPEREAIANEMHYAWLSFARTGDPNGAHLPEAWPAYTNERK------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OGT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -191361 for 3511 contacts (-54.5/contact) +
2D Compatibility (PS) -43722 + (NN) -18542 + (LL) 3164
1D Compatibility (HY) -26000 + (ID) 6000
Total energy: -282461.0 ( -80.45 by residue)
QMean score : 0.470
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