Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMIKVTDVEKSYQSAHVFKRRRTPIVKGVSFECPIGATIAIIGESGSGKSTLSRMILGIEKPDKGCVTLNDLPMHKKKVR----RHQIGAVFQDYTSSLHPFQTVREILFEVMCQCDGQPKEVMEVQAITLLEEVGLSKAYMDKYPNMLSGGEAQRVAIARAICINPKYILFDEAISSLDMSIQTQILDLLIHLRETRQLSYIFITHDIQAATYLCDQLIIFKNGKI-EEQIPTSALHKSDNAYTRELIEKQLSF
4YMV Chain:J ((1-240))MIFVNDVYKNFGSLEVLK--------GVTLKVNKGEVVVIIGPSGSGKSTLLRCINLLEEPTKGEVFIDGVKINNGKVNINKVRQKVGMVFQHF--NLFPHLTAIENITLAPVKVKKMNKKEAEELAVDLLAKVGLLDKK-DQYPIKLSGGQKQRLAIARALAMQPEVMLFDEPTSALDPEMVKEVLNVMKQL-ANEGMTMVVVTHEMGFAREVGDRVIFMDDGVIVEEGTPEEIFYRAKNERTREFLSKIL--


General information:
TITO was launched using:
RESULT:

Template: 4YMV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -186686 for 1939 contacts (-96.3/contact) +
2D Compatibility (PS) -25550 + (NN) -10926 + (LL) 1108
1D Compatibility (HY) -18400 + (ID) 4450
Total energy: -244904.0 ( -126.30 by residue)
QMean score : 0.562

(partial model without unconserved sides chains):
PDB file : Tito_4YMV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YMV-query.scw
PDB file : Tito_Scwrl_4YMV.pdb: