Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVLTDKIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKDKLQ--NVANQLAQDSVKVVPTDVTNKEEVDELMKIAQQTFGGLDIVINSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAITA------------AYNPSDRKKLDPQDIAEAVLYALTQPKHVNVNEITVRPV
3P19 Chain:A ((17-248))
------KLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQ------VDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAVLFAYQQPQNVCIREIALAP-
General information:
TITO was launched using:
RESULT:
Template:
3P19.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105886 for 1835 contacts (-57.7/contact) +
2D Compatibility (PS) -23514 + (NN) -7459 + (LL) 1268
1D Compatibility (HY) -16400 + (ID) 4200
Total energy: -156191.0 ( -85.12 by residue)
QMean score : 0.473
(partial model without unconserved sides chains):
PDB file :
Tito_3P19.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P19-query.scw
PDB file :
Tito_Scwrl_3P19.pdb
: