Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRCAKKEDLNAILAIYNDAIINTTAVYTYKPQTIDERIAWFETKQRNHEPIFVFEEN-GSVLGFATFGSFRPWPAYQYTIEHSIYVDASARGKGIASQLLQRLIVEAKAKGYRTLVAGIDASNEASIKLHQKFNFKHAGTLTNVGYKFDYWLDLAFYELDLKD
2J8N Chain:A ((5-165))
-IRDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDARARQGYPILVASDAAGEVLGYASYGDWRPFEGFRGTVEHSVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHRRLGFEISGQMPQVGQKFGRWLDLTFMQLNL--
General information:
TITO was launched using:
RESULT:
Template:
2J8N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94876 for 1162 contacts (-81.6/contact) +
2D Compatibility (PS) -17658 + (NN) -6674 + (LL) 196
1D Compatibility (HY) -16000 + (ID) 3750
Total energy: -138762.0 ( -119.42 by residue)
QMean score : 0.616
(partial model without unconserved sides chains):
PDB file :
Tito_2J8N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2J8N-query.scw
PDB file :
Tito_Scwrl_2J8N.pdb
: