Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQEILNVEGMSCGHCKSAVESALNNIDGVTSADVNLENGQVSVQYDDSKVAVSQMKDAIEDQGYDVV
2L3M Chain:A ((4-70))
MEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV-
General information:
TITO was launched using:
RESULT:
Template:
2L3M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35692 for 471 contacts (-75.8/contact) +
2D Compatibility (PS) -7168 + (NN) -1949 + (LL) 192
1D Compatibility (HY) -8000 + (ID) 1650
Total energy: -54267.0 ( -115.22 by residue)
QMean score : 0.644
(partial model without unconserved sides chains):
PDB file :
Tito_2L3M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L3M-query.scw
PDB file :
Tito_Scwrl_2L3M.pdb
: