Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTNTRRSTSSLIVHEQPKSPISEKFRGIRSNIMFANPDSAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMRKPTQHYIFNLPN-NEGLSSLLLNWSTYQDSIISTEIQDLDVLTSGPIPPNPSELITS--RAFANLYDTLLMNYNFVIIDTPPVNTVTDAQLF---SKFTG-NVVYVVNSENNNKDEVKKGKELIEATGAKLLGVVLNRMPKDKSASYYAYYGTDES
1ION Chain:A ((5-172))
-------------------------------------------ISIVSGKGGTGKTTVTANLSVALGEMGRKVLAVDGDLTMANLSLVLGVDDVNITLHDVLAGDAKLEDAIYMTQFENVYIL---PGAVDWEHVIKADPRKLPEVIKSLKGKYDFILIDCP-----AGLQLRAMSAMLSGEEAILVTNPEISCLTDTMKVGMVLKKAGLAILGFILNR------------------
General information:
TITO was launched using:
RESULT:
Template:
1ION.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73239 for 1334 contacts (-54.9/contact) +
2D Compatibility (PS) -17750 + (NN) -10798 + (LL) 3056
1D Compatibility (HY) -13600 + (ID) 2400
Total energy: -114731.0 ( -86.01 by residue)
QMean score : 0.551
(partial model without unconserved sides chains):
PDB file :
Tito_1ION.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ION-query.scw
PDB file :
Tito_Scwrl_1ION.pdb
: