Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKYKIDFSKGLVPAILQDNQTKQVLMLGYMNQEAFDKTIEDGVVCFYSRSKQRLWTKGETSGHTQLVKDIHVDCDNDTILIDVIPNGPTCHTGSQSCFNTEVPFSVQTLAQTVQDSAQSNNEKSYTKYLLTEGIEKITKKYGEEAFEVVIEAIKGDKKAFVSEVADELYHLFVLMHALGVDFSEIEAELARRHHKRNNFKGERQNIEQW |
| 3C90 Chain:X ((19-89)) | -------------------------------------------------------------------------------------------------------------------DRARTRPADSTTVAALDGGVHALGKKLLEEAGEVWLAAEHESNDALAEEISQLLYWTQVLMISRGLSLDDV------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3C90.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -4650 for 406 contacts (-11.5/contact) +
2D Compatibility (PS) -7822 + (NN) -5568 + (LL) 8984
1D Compatibility (HY) -3200 + (ID) 1100
Total energy: -13356.0 ( -32.90 by residue)
QMean score : 0.472
|
|
|