Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQLCVALDLEKKEDNLSLLQELKGLDLWAKVGLRSFIRDGATFLDEIRKIDGNFKIFLDLKLYDIPYTMANAALECAKLDIDMLTVHLSSAKSALTILMQRLNAL-KKRPLIMGVSALTSFSEEEF--LMVYNAPLKTQAITLSAIGKESGIDGVVCSVFESLAIKEALGKGFLTLTPGIRLDKNDKEDQERVANAKEAKQNLSDFIVVGRPIYQAKEPREVVLELLKDC
3UWQ Chain:A ((29-248))
-KVIVALDYDNLADALAFVDKIDPSTCRLKVGKEMFTLFGPDFVRELHK--RGFSVFLDLKFHDIPNTCSKAVKAAAELGVWMVNVHASGGERMMAASREILEPYGKERPLLIGVTVLTSMESADLQGIGILSAP-QDHVLRLATLTKNAGLDGVVCSAQEASLLKQHLGREFKLVTPGIRPA-------RRIMTPAQAIASGSDYLVIGRPITQAAHP-EVVLEEINSS
General information:
TITO was launched using:
RESULT:
Template:
3UWQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -148131 for 1697 contacts (-87.3/contact) +
2D Compatibility (PS) -22931 + (NN) -7403 + (LL) 732
1D Compatibility (HY) -16800 + (ID) 3950
Total energy: -198483.0 ( -116.96 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_3UWQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UWQ-query.scw
PDB file :
Tito_Scwrl_3UWQ.pdb
: