Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MILKSSIDRLLQTIDIVEVISSYVDLRKSGSNYMACCPFHEERSASFSVNQVKGFYYCFGCGASGDSIKFVMAFEKLSFVEALEKLAHRFNIALEYDKGVYYDHKEDYHLLEMVSSLYQEELFN--APFFLNYLQKRGLSMESIKAFKLGLCTNKIDYGIENKG---LNKDKLIELGVLGKSDKEDKTYLRFLDRIMFPIYSPSAQVVGFGGRTLKEKAAKYINSPQNKLFDKSSLLYGYHLAKEHIYKQKQVIVTEGYLDVILLHQAGFKNAIATLGTALTPSHLPLLKKGDPEILLSYDGDKAGRNAAYKA---SLMLAKEQRKGGVILFENNLDPADMIANHQIETLKNWLSRPIAFIEFVLRHMAGSYLLDDPLEKDKALKEMLGFLKNFSLLLQNEYKPLIATLLQAPLHVLGIREPVSFQPFYPKTEKPNRPQKFAHVSSMPSLEFLEKLVIRYLLEDRSLLDLAVGYIHSGVFLHKKQEFDALCQEKLDDPKLVALLLDANLPLKKGGFEKELRLLILRYFERQLKEIPKSPLSFSEKMIFLKRARQAIMKLKQGELVAI |
| 1DDE Chain:A ((22-290)) | -----------------------------------------------------------------------------------------------------------YQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLVTN----RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDSQL---------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DDE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144419 for 2045 contacts (-70.6/contact) +
2D Compatibility (PS) -27461 + (NN) -10167 + (LL) 19476
1D Compatibility (HY) -19600 + (ID) 4300
Total energy: -186471.0 ( -91.18 by residue)
QMean score : 0.412
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