Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKFLFKQKFCESLPKSFSKTLLALSLGLILLGVFIPFPKVPKHQSVPLALHFTEHYARFIPTILSVAIPLIQRDAVGLFQVANASIATTFLTHATKRALNHVTINDQR-L-----GER-----------------PYGGNFNMPSGHSSMVGLAVAFLMRRYSVK----------------------------------------------------KYLWLLPLIPLTMLARIYLDMHTIGAVLAGLGTGMLCVGLFTSPKNLN |
| 3BB0 Chain:A ((337-513)) | --------------------------------------------------------------------------------LVDVACTDAGIFSWKEKWEFEFWRPLSGVRDDGRPDHGDPFWLTLGAPATNTNDIPFKPPFPAYPSGHATFGGAVFQMVRRYYNGRVGTWKDDEPDNIAIDMMISEELNGVNRDLRQPYDPTAPIEDQPGIVRTRIVRHFDSAWELMFENAISRIFLGVHWRFDAAAARDILIPTTTKDVYAVDNN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37525 for 646 contacts (-58.1/contact) +
2D Compatibility (PS) -10606 + (NN) 700 + (LL) 6740
1D Compatibility (HY) 0 + (ID) 800
Total energy: -41491.0 ( -64.23 by residue)
QMean score : 0.200
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