Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKFVRNVVLFILTAIFLAFMLLVSYCMPHYSVAVISGVEVKRMNENENTPNNKEVKTLARDVYFVQTYDPKDQKSVTVYRNEDTRFGFPFYFKFNSADISALAQSLVNQQVEVQYYGWRINLFNMFPNVIFLKPLKESDEMSKPVFSWILYALLLVGFFISARSVCTLFKGKAH
3KA5 Chain:A ((26-54))
------------------------------------------------------------GHNFFVFQNGDS-NEVNVVYKRKDGNYGLIEPE----------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3KA5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4643 for 121 contacts (-38.4/contact) +
2D Compatibility (PS) -3301 + (NN) -4722 + (LL) 12724
1D Compatibility (HY) -1600 + (ID) 300
Total energy: -1842.0 ( -15.22 by residue)
QMean score : 0.404
(partial model without unconserved sides chains):
PDB file :
Tito_3KA5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KA5-query.scw
PDB file :
Tito_Scwrl_3KA5.pdb
: