Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLFISATNTNAGKTTCARLLAQYCNACGVKTILLKPIETGVNDAINHSSDAHLFLQDNRLLDRSLTLKDISFYRYHKASAPLIAQQEEDPNAPIDTDNLTQRLHNFTKTYDLVIVEGAGGLCVPITLEENMLDFALKLKAKMLLISHDNLGLINDCLLNDFLLKSYQLDYKIAINLRGNNTAFYSVSLPYIELFNKRSNNPIVIFQQSLKELMSFALK
3QXJ Chain:A ((23-240))
MLFISATNTNAGKTTCARLLAQYCNACGVKTILLKPIETGVNDAINHSSDAHLFLQDNRLLDRSLTLKDISFYRYHKVSAPLIAQQEEDPNAPIDTDNLTQRLHNFTKTYDLVIVEGAGGLCVPITLEENMLDFALKLKAKMLLISHDNLGLINDCLLNDFLLKSHQLDYKIAINLKGNNTAFHSISLPYIELFNTRSNNPIVIFQQSLKVLMSFALK
General information:
TITO was launched using:
RESULT:
Template:
3QXJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -165242 for 1792 contacts (-92.2/contact) +
2D Compatibility (PS) -23349 + (NN) -9842 + (LL) 0
1D Compatibility (HY) -32400 + (ID) 10550
Total energy: -241383.0 ( -134.70 by residue)
QMean score : 0.543
(partial model without unconserved sides chains):
PDB file :
Tito_3QXJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QXJ-query.scw
PDB file :
Tito_Scwrl_3QXJ.pdb
: