Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKHDAYEIILSW--FITPLTAILGRFAEFFLYTLHAQL-VFNSAVALAFMLFAYRSLKEQNFFSASALLEALWFVGFFALFNYALKNPSRFYELFQNAIFIAPNMITQSLSQSLSNFSNHALSLDFIFNHGFYALSFISDLSHN---EMSVWLFLSILQALFLSVLFAIIILVYLEAHVWCSLGALFLAFGFFKTWRSVVVICLKKCFALGFYKPFLLLVGFLNVSVTKALMDASMQEKQDLSLLLVVALFLCCVFIIGVPFFINALFRVQNSLKETYKLATNLSANLTQSAFQSLQHATTSPAPSHISSSASQSVSKEKETHSPTFKVETTQLDVKIPNFKQKKVKKDTIDTKNEI |
| 3GI8 Chain:C ((91-241)) | --------ILLWMSYVISIALFAKGFAGYFLPLINAPINTFNIAITEIGIVAFFTAL---NFFGSKAVGRAEFFIVLVALLILGLF-------IFAGLITIHPSYVIPDLAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFKSTEGLYITSALGVLFALLFNMEGVASITSAVFMVIYLFVILSHYILIDEVGGRKEIVIFSFIVVLGVFLLLLYYQWITNRFVFYGIIATFIGVLIFEIIYRKVTKRTFSN |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3GI8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -64712 for 706 contacts (-91.7/contact) +
2D Compatibility (PS) -15223 + (NN) -9444 + (LL) 1252
1D Compatibility (HY) -14000 + (ID) 2050
Total energy: -104177.0 ( -147.56 by residue)
QMean score : 0.022
|
|
|