Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKVLYALMGFLLVFSALKADDFLEEANETAPANLNHPMQDLNAIQGSFFDKNRSKMSNTLNIDYFQGQTYKIRLRYAMATLLFFSKPISDFVLGDKVGFDAKILESNDRILLIKPLQIGVDSNISVIDSEGKIFSFYVFSTTFTSSKHPNLQVFIEDKNYYTNAFIKPQKENQENMSENAPKDAQKNNKPLKEEKEETKEKEEETIIIGDNTNAMKIIKKDIQKGYKALKSSQRKWYCLWACSKKSKLSLMPKEIFNDKQFTYFKFDKRLALSKFPVIYKVVDGYDNPVNTRIVGD-YIIAEDVSTKWTLRLGKDYLCIRFVKRRKGE |
3WE5 Chain:A ((77-132)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FRFDAQYPISSPAVQFVVTDGKEAPVHPHVYSNGHICASILGSEWSPVLSVIAVCVTLQSMLASC |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WE5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23353 for 278 contacts (-84.0/contact) +
2D Compatibility (PS) -5600 + (NN) -79 + (LL) 17904
1D Compatibility (HY) -4400 + (ID) 750
Total energy: -16278.0 ( -58.55 by residue)
QMean score : 0.298
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